BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F05SP1|AL429774
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig881 1810 0.0
>3x_Contig881
Length = 2934
Score = 1810 bits (913), Expect = 0.0
Identities = 920/921 (99%), Gaps = 1/921 (0%)
Strand = Plus / Plus
Query: 1 tatcctgcttgcttgagtaccattattatgatgcaataatatccataaacaagcataaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 tatcctgcttgcttgagtaccattattatgatgcaataatatccataaacaagcataaac 1118
Query: 61 aaacagcaatataagatggaagcagcaactgaatggctactagagaatactcccataacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 aaacagcaatataagatggaagcagcaactgaatggctactagagaatactcccataacc 1178
Query: 121 aagagtgaatgtactactatcagagagtcagtggttgatggagacaccggcggttacggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 aagagtgaatgtactactatcagagagtcagtggttgatggagacaccggcggttacggt 1238
Query: 181 gtgtttgtcaatttcaccaaattaagaacacttaaaggagagaaagacagtaagtttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 gtgtttgtcaatttcaccaaattaagaacacttaaaggagagaaagacagtaagtttgaa 1298
Query: 241 cttctcaggattccgagatctgctactatatcaatgacatcgatacgagacatattggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 cttctcaggattccgagatctgctactatatcaatgacatcgatacgagacatattggct 1358
Query: 301 aaaagtacatcagaaaatgcggttactgcttccataaagggccacttgacagctttctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 aaaagtacatcagaaaatgcggttactgcttccataaagggccacttgacagctttctta 1418
Query: 361 agcgatgaaaatcaccacgcatttatcaatgaaacgaacctgatagtgatatatttggtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 agcgatgaaaatcaccacgcatttatcaatgaaacgaacctgatagtgatatatttggtc 1478
Query: 421 ctaaaggctattctttcagataataaaacttacaaacttactggattcgcatctttttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 ctaaaggctattctttcagataataaaacttacaaacttactggattcgcatctttttac 1538
Query: 481 ttgaacg-agttcttttaaagacttttgtcccacttccctgcaatacttttcaagaagat 539
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 ttgaacgaagttcttttaaagacttttgtcccacttccctgcaatacttttcaagaagat 1598
Query: 540 gccgataagtggaaccaatattacaaagagtacttgaactttcctcaacaactgttcatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 gccgataagtggaaccaatattacaaagagtacttgaactttcctcaacaactgttcatt 1658
Query: 600 gaaattataaaccgtttcatatcagcgaggtttctaggtatgaactatgaaaaattaata 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 gaaattataaaccgtttcatatcagcgaggtttctaggtatgaactatgaaaaattaata 1718
Query: 660 tccactgtttattgtagtgttatctccagaatattggagatacccgaatcctccggagag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 tccactgtttattgtagtgttatctccagaatattggagatacccgaatcctccggagag 1778
Query: 720 gatactgatgatttttttgtcagcccaactttggtcccgttattggactttgttaatcat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1779 gatactgatgatttttttgtcagcccaactttggtcccgttattggactttgttaatcat 1838
Query: 780 gacaatgaccatagaaatgctcactttgatattgatcttagaactaatgatattgtgctc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1839 gacaatgaccatagaaatgctcactttgatattgatcttagaactaatgatattgtgctc 1898
Query: 840 tatttagaactggatgatattgactctaccgtagaagaagctcaagtatttataagctat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1899 tatttagaactggatgatattgactctaccgtagaagaagctcaagtatttataagctat 1958
Query: 900 gctccagtggaagagctagtc 920
|||||||||||||||||||||
Sbjct: 1959 gctccagtggaagagctagtc 1979
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7016
Number of Sequences: 1807
Number of extensions: 7016
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)